diverse changes

Makefile

@@ -1,8 +1,693 @@
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+# target to preprocess a source file
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+# target to generate assembly for a file
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+.PHONY : semseg/operations/Operations.o
+
+# target to build an object file
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+# target to preprocess a source file
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+# target to generate assembly for a file
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+.PHONY : semseg3d_makeLabeledImage_automoc.o
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+# target to build an object file
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+# target to generate assembly for a file
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+# target to build an object file
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+.PHONY : semseg3d_testSemanticSegmentation_automoc.o
+
+# target to build an object file
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+# Help Target
+help:
+	@echo "The following are some of the valid targets for this Makefile:"
+	@echo "... all (the default if no target is provided)"
+	@echo "... clean"
+	@echo "... depend"
+	@echo "... edit_cache"
+	@echo "... install"
+	@echo "... install/local"
+	@echo "... install/strip"
+	@echo "... list_install_components"
+	@echo "... nice_semseg3d"
+	@echo "... nice_semseg3d_automoc"
+	@echo "... package"
+	@echo "... package_source"
+	@echo "... rebuild_cache"
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+	@echo "... semseg3d_makeLabeledImage_automoc"
+	@echo "... semseg3d_testLBPComputation"
+	@echo "... semseg3d_testLBPComputation_automoc"
+	@echo "... semseg3d_testRayFeatComputation"
+	@echo "... semseg3d_testRayFeatComputation_automoc"
+	@echo "... semseg3d_testSemanticSegmentation"
+	@echo "... semseg3d_testSemanticSegmentation_automoc"
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+	@echo "... semseg3d_testSemanticSegmentation_automoc.s"
+.PHONY : help
+
+
+
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+# Special targets to cleanup operation of make.
+
+# Special rule to run CMake to check the build system integrity.
+# No rule that depends on this can have commands that come from listfiles
+# because they might be regenerated.
+cmake_check_build_system:
+	cd /home/sickert/src/nice-gl && $(CMAKE_COMMAND) -H$(CMAKE_SOURCE_DIR) -B$(CMAKE_BINARY_DIR) --check-build-system CMakeFiles/Makefile.cmake 0
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semseg/SemSegContextTree.cpp

@@ -52,6 +52,7 @@ SemSegContextTree::SemSegContextTree () : SemanticSegmentation ()
   this->useShannonEntropy   = true;
   this->nbTrees             = 10;
   this->randomTests         = 10;
+  this->useAltTristimulus   = false;
   this->useGradient         = true;
   this->useWeijer           = false;
   this->useAdditionalLayer  = false;
@@ -95,6 +96,7 @@ SemSegContextTree::SemSegContextTree (
   this->nbTrees             = conf->gI ( section, "amount_trees", 10 );
   this->randomTests         = conf->gI ( section, "random_tests", 10 );
 
+  this->useAltTristimulus   = conf->gB ( featsec, "use_alt_trist", false );
   this->useGradient         = conf->gB ( featsec, "use_gradient", true );
   this->useWeijer           = conf->gB ( featsec, "use_weijer", true );
   this->useAdditionalLayer  = conf->gB ( featsec, "use_additional_layer", false );
@@ -1464,8 +1466,16 @@ void SemSegContextTree::addFeatureMaps (
           G = ( double )imgData.get( x, y, z, 1 ) / 255.0;
           B = ( double )imgData.get( x, y, z, 2 ) / 255.0;
 
-          ColorConversion::ccRGBtoXYZ( R, G, B, &X, &Y, &Z, 0 );
-          ColorConversion::ccXYZtoCIE_Lab( X, Y, Z, &L, &a, &b, 0 );
+          if ( useAltTristimulus )
+          {
+            ColorConversion::ccRGBtoXYZ( R, G, B, &X, &Y, &Z, 4 );
+            ColorConversion::ccXYZtoCIE_Lab( X, Y, Z, &L, &a, &b, 4 );
+          }
+          else
+          {
+            ColorConversion::ccRGBtoXYZ( R, G, B, &X, &Y, &Z, 0 );
+            ColorConversion::ccXYZtoCIE_Lab( X, Y, Z, &L, &a, &b, 0 );
+          }
 
           imgData.set( x, y, z, L, 0 );
           imgData.set( x, y, z, a, 1 );
@@ -2206,14 +2216,11 @@ void SemSegContextTree::restore ( std::istream & is, int format )
           {
             if ( forest[t][n].feat == NULL )
             {
-//              for ( uint c = 0; c < ops[o].size(); c++ )
-//              {
-                if ( ops[o][o2]->getOps() == feattype )
-                {
-                  forest[t][n].feat = ops[o][o2]->clone();
-                  break;
-                }
-//              }
+              if ( ops[o][o2]->getOps() == feattype )
+              {
+                forest[t][n].feat = ops[o][o2]->clone();
+                break;
+              }
             }
           }
         }

semseg/SemSegContextTree.h

@@ -108,6 +108,9 @@ private:
   /** Number of trees used for the forest */
   int nbTrees;
 
+  /** whether to use alternative tristimulus for CIE_Lab that matches openCV or not */
+  bool useAltTristimulus;
+
   /** use Gradient image or not */
   bool useGradient;
 

semseg/operations/Operations.cpp

@@ -7,6 +7,7 @@ using namespace NICE;
 Operation::Operation()
 {
   init = false;
+  context = false;
 }
 
 void Operation::set ( int _x1, int _y1, int _z1, int _x2, int _y2, int _z2, int _channel1, int _channel2, int _featType )