{
 "cells": [
  {
   "cell_type": "code",
   "execution_count": 1,
   "metadata": {},
   "outputs": [],
   "source": [
    "import pandas as pd\n",
    "import numpy as np\n",
    "\n",
    "from src.preprocessing.synthetic_data import SIR, I\n",
    "from src.preprocessing.transform_data import transform_data, transform_jh_germany_data, transform_paper_data\n",
    "\n",
    "from src.plotter import Plotter"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 2,
   "metadata": {},
   "outputs": [],
   "source": [
    "plotter = Plotter()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": null,
   "metadata": {},
   "outputs": [],
   "source": [
    "transform_paper_data()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 3,
   "metadata": {},
   "outputs": [],
   "source": [
    "dataset_path = './datasets/COVID-19-Todesfaelle_in_Deutschland/'\n",
    "datatset_name = 'COVID-19-Todesfaelle_Deutschland.csv'\n",
    "\n",
    "df = pd.read_csv(dataset_path + datatset_name)\n",
    "\n",
    "plotter.plot(df[\"Berichtsdatum\"].to_numpy(), \n",
    "             [df[\"Todesfaelle_gesamt\"].to_numpy(), df[\"Faelle_gesamt\"].to_numpy()],\n",
    "             [\"Total number of death cases\", \"Total number of infection cases\"], \n",
    "             \"dataset_visualization\",\n",
    "             \"Death case dataset (RKI)\",\n",
    "             (12, 6),\n",
    "             y_log_scale=True, \n",
    "             xlabel=\"Date of reported data\")\n",
    "\n",
    "\n",
    "# df.plot(logy=True, x='Berichtsdatum', rot=45)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 4,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "reference_params_synth 0.35 0.5\n",
      "high_alpha_synth 0.45 0.5\n",
      "low_alpha_synth 0.25 0.5\n",
      "high_beta_synth 0.35 0.4\n",
      "low_beta_synth 0.35 0.6\n"
     ]
    }
   ],
   "source": [
    "# https://maa.org/press/periodicals/loci/joma/the-sir-model-for-spread-of-disease-the-differential-equation-model\n",
    "params = {'reference_params_synth' : (0.35, 0.5, 'reference parameters'),\n",
    "          'high_alpha_synth' : (0.45, 0.5, r'high $\\alpha$'),\n",
    "          'low_alpha_synth' : (0.25, 0.5, r'low $\\alpha$'),\n",
    "          'high_beta_synth' : (0.35, 0.4, r'high $\\beta$'),\n",
    "          'low_beta_synth' : (0.35, 0.6, r'low $\\beta$')}\n",
    "for params_set_name in params.keys():\n",
    "    print(params_set_name, params[params_set_name][0], params[params_set_name][1])\n",
    "    synth_sir_data = SIR(plotter, N=59e6, I_0=1, alpha=params[params_set_name][0], beta=params[params_set_name][1], simulation_time=500, time_points=500)\n",
    "    synth_sir_data.generate()\n",
    "    synth_sir_data.plot(params[params_set_name][2], file_name=params_set_name)"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 5,
   "metadata": {},
   "outputs": [],
   "source": [
    "synth_sir_data = SIR(plotter, N=7.6e6, I_0=10, alpha=1/3, beta=1/2, simulation_time=150, time_points=150)\n",
    "synth_sir_data.generate()\n",
    "synth_sir_data.plot('synthetic SIR data', \"SIR_synth\")\n",
    "synth_sir_data.save()"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 6,
   "metadata": {},
   "outputs": [],
   "source": [
    "synth_i_data = I(plotter, 7.6e6, 10**5, I_0=10, alpha=1/3, time_points=150)\n",
    "synth_i_data.generate()\n",
    "synth_i_data.plot('synthetic I data', 'I_synth')\n",
    "synth_i_data.save()\n"
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 7,
   "metadata": {},
   "outputs": [
    {
     "name": "stdout",
     "output_type": "stream",
     "text": [
      "Bremen\n",
      "Sachsen\n",
      "Schleswig Holstein\n",
      "Niedersachsen\n",
      "Mecklenburg-Vorpommern\n",
      "Hamburg\n",
      "Rheinland-Pfalz\n",
      "Brandenburg\n",
      "Nordrhein-Westfalen\n",
      "Berlin\n",
      "Thüringen\n",
      "Hessen\n",
      "Saarland\n",
      "Bayern\n",
      "Baden-Württemberg\n",
      "Sachsen-Anhalt\n"
     ]
    }
   ],
   "source": [
    "states = ['Bremen', \n",
    "          'Sachsen', \n",
    "          'Schleswig Holstein', \n",
    "          'Niedersachsen', \n",
    "          'Mecklenburg-Vorpommern', \n",
    "          'Hamburg', \n",
    "          'Rheinland-Pfalz',\n",
    "          'Brandenburg',\n",
    "          'Nordrhein-Westfalen',\n",
    "          'Berlin',\n",
    "          'Thüringen',\n",
    "          'Hessen',\n",
    "          'Saarland',\n",
    "          'Bayern',\n",
    "          'Baden-Württemberg',\n",
    "          'Sachsen-Anhalt']\n",
    "\n",
    "transform_data(plotter, state_name='Germany', model=\"SIR\")\n",
    "transform_data(plotter, state_name='Germany', model=\"I\")\n",
    "transform_data(plotter, state_name='Germany', model=\"I\", alpha=1/5)\n",
    "for state in states:\n",
    "    print(state)\n",
    "    transform_data(plotter, state_name=state, model=\"SIR\")\n",
    "    transform_data(plotter, state_name=state, model=\"I\")\n",
    "    transform_data(plotter, state_name=state, model=\"I\", alpha=1/5)\n",
    "    "
   ]
  },
  {
   "cell_type": "code",
   "execution_count": 8,
   "metadata": {},
   "outputs": [
    {
     "name": "stderr",
     "output_type": "stream",
     "text": [
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:48: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  infections[i] = date_df['Confirmed'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:49: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  deaths[i] = date_df['Deaths'].fillna(0).astype(int)\n",
      "/home/rothenbeck/Covid_19_DINN/src/preprocessing/transform_data.py:50: FutureWarning: Calling float on a single element Series is deprecated and will raise a TypeError in the future. Use float(ser.iloc[0]) instead\n",
      "  recoveries[i] = date_df['Recovered'].fillna(0).astype(int)\n"
     ]
    }
   ],
   "source": [
    "transform_jh_germany_data(plotter, model=\"SIR\")"
   ]
  }
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